STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phipPleckstrin homology domain interacting protein. (1834 aa)    
Predicted Functional Partners:
mysm1
Myb like, SWIRM and MPN domains 1.
   
 0.821
mad2l1
Mitotic arrest deficient 2 like 1.
   
 0.800
taf1
TATA-box binding protein associated factor 1.
   
0.793
LOC114869055
Transcription initiation factor TFIID subunit 9-like.
    
 0.786
taf12
TATA-box binding protein associated factor 12.
   
 0.786
taf10
TATA-box binding protein associated factor 10.
    
 0.785
taf2
TATA-box binding protein associated factor 2.
   
 0.784
cdc16
Cell division cycle 16.
   
 0.782
cpsf1
Cleavage and polyadenylation specific factor 1.
   
 0.777
anapc4
Anaphase promoting complex subunit 4.
    
 0.775
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.