STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cluhClustered mitochondria homolog. (1389 aa)    
Predicted Functional Partners:
mtx3
Metaxin 3.
     
 0.735
LOC114842747
Metaxin-1-like.
     
 0.735
TOMM7
Translocase of outer mitochondrial membrane 7.
     
 0.729
eif3b
Eukaryotic translation initiation factor 3 subunit B.
   
 
 0.675
eif3a
Eukaryotic translation initiation factor 3 subunit A.
   
 
 0.659
mtx2
Metaxin 2.
     
 0.642
trap1
TNF receptor associated protein 1.
   
   0.633
LOC114845925
Eukaryotic translation initiation factor 3 subunit C.
   
 
 0.617
eif3g
Eukaryotic translation initiation factor 3 subunit G.
    
 
 0.611
pum2
Pumilio RNA binding family member 2.
    
   0.600
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.