STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arid4aAT-rich interaction domain 4A. (1195 aa)    
Predicted Functional Partners:
actl6a
Actin like 6A.
   
 0.999
LOC114851763
Histone-binding protein RBBP7.
   
 0.998
wdr73
WD repeat domain 73.
   
 0.998
rbbp4
RB binding protein 4, chromatin remodeling factor.
   
 0.998
phf12
PHD finger protein 12.
    
 0.997
suds3
SDS3 homolog, SIN3A corepressor complex component.
   
 0.996
sap30l
SAP30 like.
    
 0.996
ENSBSLP00000000230
BRMS1 transcriptional repressor and anoikis regulator.
   
 0.995
LOC114847256
Breast cancer metastasis-suppressor 1 homolog.
   
 0.995
sin3b
SIN3 transcription regulator family member B.
    
 0.995
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.