STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nap1l1Nucleosome assembly protein 1 like 1. (438 aa)    
Predicted Functional Partners:
rps6
Ribosomal protein S6.
   
 
 0.917
H2AZ1
Histone H2A.Z.
   
 
 0.895
LOC114862464
Histone H2A.V.
   
 
 0.895
UBE2O
Ubiquitin conjugating enzyme E2 O.
    
 
 0.887
sdad1
SDA1 domain containing 1.
    
 
 0.863
rpl39
Ribosomal protein L39.
   
 
 0.859
ipo9
Importin 9.
   
 
 0.772
ENSBSLP00000055225
Shisa family member 4.
   
 
 0.772
LOC114868929
Core histone macro-H2A.1.
    
 
 0.721
LOC114842109
Core histone macro-H2A.2-like.
    
 
 0.721
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.