STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114854345Doublesex- and mab-3-related transcription factor 2-like. (416 aa)    
Predicted Functional Partners:
kptn
Kaptin, actin binding protein.
    
 0.849
SZT2
SZT2 subunit of KICSTOR complex.
    
 0.846
depdc5
DEP domain containing 5, GATOR1 subcomplex subunit.
   
 0.835
wdr59
WD repeat domain 59.
    
 0.832
wdr24
WD repeat domain 24.
    
 0.832
nprl2
NPR2 like, GATOR1 complex subunit.
    
 0.814
itfg2
Integrin alpha FG-GAP repeat containing 2.
    
 0.665
LOC114866699
DNA repair protein XRCC4-like.
    
 0.665
immp1l
Inner mitochondrial membrane peptidase subunit 1.
    
 0.665
nprl3
NPR3 like, GATOR1 complex subunit.
     
 0.630
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.