STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114859477Myosin-binding protein H-like. (525 aa)    
Predicted Functional Partners:
arid4b
AT-rich interaction domain 4B.
    
 0.901
arid4a
AT-rich interaction domain 4A.
    
 0.901
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.898
ENSBSLP00000013061
annotation not available
 
 
 
0.895
actl6a
Actin like 6A.
    
 0.813
dctn2
Dynactin subunit 2.
    
 0.804
actr8
Actin related protein 8.
    
 0.800
arpc3
Actin related protein 2/3 complex subunit 3.
   
 0.797
dctn4
Dynactin subunit 4.
    
 0.794
capzb
Capping actin protein of muscle Z-line subunit beta.
   
 0.794
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.