STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114859379FK506-binding protein-like. (361 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.970
ankrd49
Ankyrin repeat domain 49.
   
 0.904
ENSBSLP00000048337
annotation not available
   
 0.831
tep1
Telomerase associated protein 1.
   
 0.814
bbs9
Bardet-Biedl syndrome 9.
    
 0.786
bag3
BCL2 associated athanogene 3.
    
 0.781
nudt12
Nudix hydrolase 12.
   
  0.772
LOC114862841
Kinesin-like protein KIN-14E.
    
 0.771
ttc8
Tetratricopeptide repeat domain 8.
    
 0.764
glyr1
Glyoxylate reductase 1 homolog.
    
 0.760
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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