STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnnt1Troponin T1, slow skeletal type. (259 aa)    
Predicted Functional Partners:
LOC114857680
Troponin I, slow skeletal muscle-like.
 
 
 0.952
LOC114856213
Troponin I, slow skeletal muscle-like.
 
 0.946
tnni1
Troponin I1, slow skeletal type.
 
 0.945
LOC114856745
Troponin I, fast skeletal muscle-like.
 
 
 0.941
LOC114851975
Troponin I, fast skeletal muscle-like.
 
 
 0.941
LOC114862097
Troponin I, slow skeletal muscle-like.
 
 
 0.941
LOC114856746
Troponin I, fast skeletal muscle-like.
 
 
 0.921
myl1
Myosin light chain 1.
   
 0.916
LOC114858635
Troponin C, skeletal muscle.
   
 0.886
tnnc2
Troponin C2, fast skeletal type.
   
 0.886
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.