STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apipAPAF1 interacting protein. (245 aa)    
Predicted Functional Partners:
enoph1
Enolase-phosphatase 1.
 
 0.994
adi1
Acireductone dioxygenase 1.
 
 
 0.978
mri1
Methylthioribose-1-phosphate isomerase 1.
 
 
 0.965
xylb
Xylulokinase.
  
 
 0.892
apaf1
Apoptotic peptidase activating factor 1.
    
 0.886
tpi1
Triosephosphate isomerase 1.
  
 
 0.847
mtap
Methylthioadenosine phosphorylase.
  
 
 0.816
rbm45
RNA binding motif protein 45.
     
 0.778
adhfe1
Alcohol dehydrogenase iron containing 1.
  
 
 0.777
rpe
Ribulose-5-phosphate-3-epimerase.
    
 0.773
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.