STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ncf1Neutrophil cytosolic factor 1. (441 aa)    
Predicted Functional Partners:
LOC114842656
Neutrophil cytosol factor 4-like.
   
 0.991
LOC114870711
Neutrophil cytosol factor 4-like.
   
 0.991
LOC114852765
Cytochrome b-245 light chain.
   
 0.989
LOC114854359
Neutrophil cytosol factor 2-like.
   
 0.989
ENSBSLP00000031759
NADPH oxidase activator 1.
   
 0.988
nox4
NADPH oxidase 4.
   
 0.968
LOC114851168
Cytochrome b-245 heavy chain.
   
 0.898
nox1
NADPH oxidase 1.
   
 0.895
noxo1
NADPH oxidase organizer 1.
     
0.890
LOC114846474
NADPH oxidase organizer 1-like.
     
0.890
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.