STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ncoa6Nuclear receptor coactivator 6. (2357 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.996
ash2l
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.995
rbbp5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.995
bysl
Bystin like.
   
 0.993
tsr1
TSR1 ribosome maturation factor.
   
 0.988
nob1
NIN1 (RPN12) binding protein 1 homolog.
   
 0.983
imp3
IMP U3 small nucleolar ribonucleoprotein 3.
   
 0.982
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
   
 0.980
riok2
RIO kinase 2.
   
 0.980
aatf
Apoptosis antagonizing transcription factor.
   
 0.979
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.