STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC26A9Solute carrier family 26 member 9. (771 aa)    
Predicted Functional Partners:
ENSBSLP00000006288
annotation not available
    
 0.822
LOC114857843
Heme-binding protein 1-like.
   
 0.820
mre11
MRE11 homolog, double strand break repair nuclease.
  
  0.804
RAB7A
Ras-related protein rab7-like.
 
   
  0.661
LOC114855873
Ras-related protein rab7.
 
   
  0.661
gatb
glutamyl-tRNA amidotransferase subunit B.
    
  0.636
cftr
CF transmembrane conductance regulator.
    
 
 0.626
qrsl1
glutaminyl-tRNA amidotransferase subunit QRSL1.
  
 
 0.560
lgsn
Lengsin, lens protein with glutamine synthetase domain.
   
 
 0.558
faah2
Fatty acid amide hydrolase 2.
  
 
  0.558
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.