STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfc5Replication factor C subunit 5. (341 aa)    
Predicted Functional Partners:
rfc4
Replication factor C subunit 4.
  
0.999
rfc1
Replication factor C subunit 1.
   
 0.999
pcna
Proliferating cell nuclear antigen.
  
 0.999
rfc3
Replication factor C subunit 3.
   
0.999
rfc2
Replication factor C subunit 2.
   
0.999
rad17
RAD17 checkpoint clamp loader component.
   
 0.999
chtf18
Chromosome transmission fidelity factor 18.
   
 0.997
chtf8
Chromosome transmission fidelity factor 8.
   
 0.994
dscc1
DNA replication and sister chromatid cohesion 1.
   
 0.991
slf1
SMC5-SMC6 complex localization factor 1.
  
 0.990
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.