STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etfrf1Electron transfer flavoprotein regulatory factor 1. (85 aa)    
Predicted Functional Partners:
etfa
Electron transfer flavoprotein subunit alpha.
   
 
 0.904
ndufab1
NADH:ubiquinone oxidoreductase subunit AB1.
    
 
 0.809
palb2
Partner and localizer of BRCA2.
    
 
 0.752
etfb
Electron transfer flavoprotein subunit beta.
    
 
 0.697
mrpl46
Mitochondrial ribosomal protein L46.
    
   0.637
lyrm1
LYR motif containing 1.
      
 0.550
ENSBSLP00000050898
annotation not available
   
  
 0.544
ENSBSLP00000006288
annotation not available
      
 0.508
ENSBSLP00000051879
annotation not available
   
  
 0.494
sdhaf3
Succinate dehydrogenase complex assembly factor 3.
      
 0.471
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.