STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sarm1Sterile alpha and TIR motif containing 1. (714 aa)    
Predicted Functional Partners:
traf6
TNF receptor associated factor 6.
    
 0.765
myd88
MYD88 innate immune signal transduction adaptor.
    
 
 0.732
LOC114862140
Transmembrane emp24 domain-containing protein 7-like.
    
 0.670
LOC114845051
TIR domain-containing adapter molecule 1-like.
    
 0.670
ENSBSLP00000013473
Toll-interleukin 1 receptor (TIR) domain containing adaptor protein.
    
 
 0.628
nmnat2
Nicotinamide nucleotide adenylyltransferase 2.
    
 
 0.596
traf4
TNF receptor associated factor 4.
    
 0.574
RS1
Retinoschisin-like.
    
 
 0.533
ube4b
Ubiquitination factor E4B.
      
 0.528
ripk1
Receptor interacting serine/threonine kinase 1.
    
 0.504
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.