STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nsd3Nuclear receptor binding SET domain protein 3. (1602 aa)    
Predicted Functional Partners:
dot1l
DOT1 like histone lysine methyltransferase.
   
 0.890
camkmt
Calmodulin-lysine N-methyltransferase.
     
 0.847
plod2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
    
 0.842
plod1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
    
 0.842
ash2l
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.827
rbbp5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.825
setd2
SET domain containing 2, histone lysine methyltransferase.
   
 
0.791
eed
Embryonic ectoderm development.
   
 0.781
kmt2e
Lysine methyltransferase 2E.
   
 0.770
smyd3
SET and MYND domain containing 3.
     
 0.759
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.