STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000019027annotation not available (834 aa)    
Predicted Functional Partners:
ENSBSLP00000015271
BRCA1/BRCA2-containing complex, subunit 3.
    
 0.889
babam2
BRISC and BRCA1 A complex member 2.
    
 0.889
babam1
BRISC and BRCA1 A complex member 1.
    
 0.888
brca1
BRCA1 DNA repair associated.
    
 0.876
bard1
BRCA1 associated RING domain 1.
    
 0.816
rps27a
Ribosomal protein S27a.
    
  0.796
ENSBSLP00000037601
Ubiquitin B.
    
  0.793
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.783
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
    
  0.746
ENSBSLP00000006288
annotation not available
    
 0.690
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.