STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114865787gasdermin-E-like. (316 aa)    
Predicted Functional Partners:
LOC114870705
Cytochrome c iso-1/iso-2.
     
 0.679
LOC114865843
Uncharacterized LOC114865843.
     
 0.617
LOC114869232
High mobility group protein B1-like.
     
 0.608
LOC114868076
High mobility group protein B1-like.
     
 0.608
ENSBSLP00000036627
High mobility group box 2a.
     
 0.608
LOC114852088
High mobility group protein B2-like.
     
 0.608
LOC114866925
High mobility group protein B2-like.
     
 0.565
cenpu
Centromere protein U.
     
 0.547
casp3
Caspase 3.
     
 0.547
LOC114858837
Caspase-3-like.
     
 0.547
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.