STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fgf2Fibroblast growth factor 2. (155 aa)    
Predicted Functional Partners:
fgfr2
Fibroblast growth factor receptor 2.
    
 0.957
LOC114861756
Fibroblast growth factor receptor 1-A-like.
    
 0.944
LOC114848555
Fibroblast growth factor receptor 3.
    
 0.920
LOC114869627
Fibroblast growth factor receptor 4-like.
    
 0.920
flt3
Fms related tyrosine kinase 3.
   
 0.915
pdgfra
Platelet derived growth factor receptor alpha.
   
 0.915
flt1
Fms related tyrosine kinase 1.
   
 0.906
tie1
Tyrosine kinase with immunoglobulin like and EGF like domains 1.
    
 0.905
pdgfrb
Platelet derived growth factor receptor beta.
   
 0.894
csf1r
Colony stimulating factor 1 receptor.
    
 0.889
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.