STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114854813Low-density lipoprotein receptor-related protein 8-like. (1019 aa)    
Predicted Functional Partners:
RELN
Reelin.
    
 0.923
pcsk9
Proprotein convertase subtilisin/kexin type 9.
    
 0.900
ldlrap1
Low density lipoprotein receptor adaptor protein 1.
    
 0.873
dkk1
Dickkopf WNT signaling pathway inhibitor 1.
    
 0.823
mylip
Myosin regulatory light chain interacting protein.
    
 0.820
LOC114844080
Disabled homolog 1-like.
    
 0.808
dab1
DAB adaptor protein 1.
    
 0.808
mst1r
Macrophage stimulating 1 receptor.
    
  0.795
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.795
LOC114856141
Macrophage-stimulating protein receptor-like.
    
  0.795
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.