STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
samhd1SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1. (627 aa)    
Predicted Functional Partners:
LOC114855470
DDB1- and CUL4-associated factor 1-like.
    
 
 0.896
DCAF1
DDB1 and CUL4 associated factor 1.
    
 
 0.896
tk2
Thymidine kinase 2.
   
 
 0.669
ccna2
Cyclin A2.
    
 
 0.538
ccna1
Cyclin A1.
    
 
 0.538
ddb1
Damage specific DNA binding protein 1.
    
 
 0.474
rnaseh2a
Ribonuclease H2 subunit A.
     
 0.450
dck
Deoxycytidine kinase.
   
 
 0.447
ENSBSLP00000038946
annotation not available
   
 
 0.447
cep97
Centrosomal protein 97.
   
 
 0.445
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.