STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fanciFA complementation group I. (1325 aa)    
Predicted Functional Partners:
fancd2
FA complementation group D2.
   
 0.999
fancl
FA complementation group L.
    
 0.995
fancm
FA complementation group M.
   
 0.994
wdr48
WD repeat domain 48.
    
 0.984
usp1
Ubiquitin specific peptidase 1.
   
 0.982
brca1
BRCA1 DNA repair associated.
   
 0.980
FANCA
FA complementation group A.
   
 0.979
fancg
FA complementation group G.
   
 0.979
ube2t
Ubiquitin conjugating enzyme E2 T.
   
 0.979
rps27a
Ribosomal protein S27a.
    
  0.978
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.