STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apbb1Amyloid beta precursor protein binding family B member 1. (677 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
    
 0.855
LOC114846772
Amyloid-beta A4 protein-like.
    
 0.855
aplp2
Amyloid beta precursor like protein 2.
    
 0.811
aplp1
Amyloid beta precursor like protein 1.
    
 0.800
mre11
MRE11 homolog, double strand break repair nuclease.
   
  0.693
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.691
rad50
RAD50 double strand break repair protein.
   
 0.645
eci2
enoyl-CoA delta isomerase 2.
    
  0.644
nuf2
NUF2 component of NDC80 kinetochore complex.
   
 0.632
wdr90
WD repeat domain 90.
   
 0.627
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.