STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114858646Heterogeneous nuclear ribonucleoprotein A1-like. (402 aa)    
Predicted Functional Partners:
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 0.961
LOC114866707
Heterogeneous nuclear ribonucleoprotein K-like.
   
 0.956
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.956
LOC114845192
Heterogeneous nuclear ribonucleoprotein C-like.
   
 0.936
tep1
Telomerase associated protein 1.
   
 0.925
hnrnpu
Heterogeneous nuclear ribonucleoprotein U.
   
 0.909
rbmx
RNA binding motif protein X-linked.
  
0.908
LOC114851941
Heterogeneous nuclear ribonucleoprotein C-like.
   
 0.881
srsf2
Serine and arginine rich splicing factor 2.
  
 0.860
hnrnpa3
Heterogeneous nuclear ribonucleoprotein A3.
  
 
0.852
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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