STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FABP6Gastrotropin-like. (125 aa)    
Predicted Functional Partners:
LOC114849064
Fatty acid-binding protein, brain-like.
     
 0.883
LOC114855454
Fatty acid-binding protein, intestinal-like.
     
 0.864
LOC114843517
Fatty acid-binding protein, adipocyte-like.
     
 0.854
LOC114865976
Fatty acid-binding protein, adipocyte-like.
     
 0.854
LOC114865701
Fatty acid-binding protein, heart-like.
     
 0.854
LOC114870374
Fatty acid-binding protein, intestinal-like.
     
 0.853
LOC114844674
Gastrotropin-like.
  
  
 
0.844
ENSBSLP00000025712
annotation not available
     
 0.630
crabp1
Cellular retinoic acid binding protein 1.
     
 0.630
LOC114865714
Cellular retinoic acid-binding protein 2-like.
     
 0.630
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.