STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gosr1Golgi SNAP receptor complex member 1. (253 aa)    
Predicted Functional Partners:
bet1
Bet1 golgi vesicular membrane trafficking protein.
    
 0.998
stx5
Syntaxin 5.
    
 0.998
gosr2
Golgi SNAP receptor complex member 2.
   
 0.997
BET1L
Bet1 golgi vesicular membrane trafficking protein like.
    
 0.997
ykt6
YKT6 v-SNARE homolog.
    
 0.995
LOC114844455
Vesicle-trafficking protein SEC22b-like.
    
 0.994
LOC114862899
Vesicle-associated membrane protein 8-like.
    
 0.991
uso1
USO1 vesicle transport factor.
    
 0.985
use1
Unconventional SNARE in the ER 1.
   
 0.983
golga2
Golgin A2.
    
 0.983
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.