STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000019953annotation not available (129 aa)    
Predicted Functional Partners:
ENSBSLP00000019971
annotation not available
 
     0.926
vps35
VPS35 retromer complex component.
    
 0.812
vps29
VPS29 retromer complex component.
     
 0.776
vps26a
VPS26, retromer complex component A.
     
 0.675
vps26b
VPS26, retromer complex component B.
     
 0.675
LOC114869772
Vacuolar protein sorting-associated protein 26B-like.
     
 0.675
snx12
Sorting nexin 12.
    
 0.674
snx3
Sorting nexin 3.
    
 0.674
ENSBSLP00000013006
Sorting nexin 3.
    
 0.674
LOC114865838
Sorting nexin-10A-like.
    
 0.674
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.