STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UNC119Protein unc-119 homolog A-like. (252 aa)    
Predicted Functional Partners:
arl2
ADP ribosylation factor like GTPase 2.
    
 
 0.933
LOC114866637
ADP-ribosylation factor-like protein 3.
    
 0.931
arl3
ADP ribosylation factor like GTPase 3.
    
 0.931
LOC114865056
ADP-ribosylation factor-like protein 3.
    
 0.918
rp2
RP2 activator of ARL3 GTPase.
     
 0.694
nphp3
Nephrocystin 3.
    
 0.684
c12h5orf30
Chromosome 12 C5orf30 homolog.
    
 
 0.659
tbcc
Tubulin folding cofactor C.
     
 0.642
lzts1
Leucine zipper tumor suppressor 1.
    
   0.606
UNC79
Unc-79 homolog, NALCN channel complex subunit.
      
 0.577
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.