STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ajubaAjuba LIM protein. (772 aa)    
Predicted Functional Partners:
lats1
Large tumor suppressor kinase 1.
    
 0.912
lats2
Large tumor suppressor kinase 2.
    
 0.912
sav1
Salvador family WW domain containing protein 1.
   
 0.895
LOC114851413
HAUS augmin-like complex subunit 3.
   
 0.875
haus1
HAUS augmin like complex subunit 1.
   
 0.870
haus8
HAUS augmin like complex subunit 8.
    
 0.857
wtip
WT1 interacting protein.
    
 
0.827
LIMD1
LIM domains containing 1.
    
 
0.827
haus7
HAUS augmin like complex subunit 7.
    
 0.812
haus2
HAUS augmin like complex subunit 2.
    
 0.800
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.