STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114859868Endoplasmic reticulum protein SC65-like. (424 aa)    
Predicted Functional Partners:
p3h3
Prolyl 3-hydroxylase 3.
  
0.834
ppib
Peptidylprolyl isomerase B.
   
 0.826
p3h2
Prolyl 3-hydroxylase 2.
   
0.820
PPIC
Peptidyl-prolyl cis-trans isomerase C-like.
   
 0.740
ENSBSLP00000036676
Peptidylprolyl isomerase C.
   
 0.740
LOC114870477
Collagen alpha-1(XVII) chain-like.
    
  0.609
ticrr
TOPBP1 interacting checkpoint and replication regulator.
   
 0.555
p4hb
Prolyl 4-hydroxylase subunit beta.
   
 
 0.540
LOC114855699
Protein disulfide-isomerase-like.
   
 
 0.540
ENSBSLP00000024914
annotation not available
    
 0.522
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.