STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000020642annotation not available (798 aa)    
Predicted Functional Partners:
rag2
Recombination activating 2.
   
 0.874
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
    
  0.746
bard1
BRCA1 associated RING domain 1.
    
 0.741
ENSBSLP00000006288
annotation not available
    
 0.690
LOC114857843
Heme-binding protein 1-like.
    
 0.689
pla2g4a
Phospholipase A2 group IVA.
     
 0.668
rpl21
Ribosomal protein L21.
   
   0.625
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.611
babam1
BRISC and BRCA1 A complex member 1.
    
 0.582
rpl13a
Ribosomal protein L13a.
   
 
 0.581
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.