STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
myo5bMyosin VB. (1811 aa)    
Predicted Functional Partners:
LOC114853438
Ras-related protein Rab-11B-like.
   
 0.828
LOC114853437
Ras-related protein Rab-11B.
   
 0.828
LOC114842621
Ras-related protein Rab-11A-like.
   
 0.828
LOC114844831
Ras-related protein Rab-11B-like.
   
 0.828
exoc4
Exocyst complex component 4.
    
 0.757
calm3
Calmodulin 3.
    
 0.748
LOC114849035
Calmodulin.
    
 0.748
LOC114849214
Calmodulin.
    
 0.748
calm2
Calmodulin 2.
    
 0.740
LOC114851210
Melanophilin-like.
    
 0.729
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.