STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114861276Coiled-coil domain-containing protein 158-like. (967 aa)    
Predicted Functional Partners:
LOC114864912
Malate synthase-like.
   
 
 0.890
ENSBSLP00000028298
annotation not available
  
 
  0.613
bard1
BRCA1 associated RING domain 1.
    
 0.602
espl1
Extra spindle pole bodies like 1, separase.
   
 0.581
PLK1
Polo like kinase 1.
   
 0.550
plk2
Polo like kinase 2.
   
 0.550
plk3
Polo like kinase 3.
   
 0.550
plk4
Polo like kinase 4.
   
 0.550
LOC114857213
P53-induced death domain-containing protein 1-like.
    
  0.548
lrguk
Leucine rich repeats and guanylate kinase domain containing.
    
 0.539
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.