STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl30Mitochondrial ribosomal protein L30. (160 aa)    
Predicted Functional Partners:
mrpl19
Mitochondrial ribosomal protein L19.
   
 
 0.997
mrpl47
Mitochondrial ribosomal protein L47.
   
   0.997
mrpl17
Mitochondrial ribosomal protein L17.
   
 
 0.996
LOC114857384
39S ribosomal protein L23, mitochondrial-like.
   
   0.995
mrpl41
Mitochondrial ribosomal protein L41.
   
 
 0.995
mrpl16
Mitochondrial ribosomal protein L16.
   
 0.993
mrpl22
Mitochondrial ribosomal protein L22.
   
 
 0.992
mrpl13
Mitochondrial ribosomal protein L13.
   
   0.992
mrpl4
Mitochondrial ribosomal protein L4.
   
 
 0.991
mrps16
Mitochondrial ribosomal protein S16.
   
 
 0.991
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.