STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114865660Palmitoyltransferase ZDHHC3-like. (298 aa)    
Predicted Functional Partners:
prep
Prolyl endopeptidase.
   
  
 0.623
pot1
Protection of telomeres 1.
    
 0.615
LOC114857554
Uncharacterized LOC114857554.
    
 0.584
rad50
RAD50 double strand break repair protein.
    
 0.532
coq3
Coenzyme Q3, methyltransferase.
     
 0.532
LOC114856226
Golgin subfamily A member 7-like.
    
 0.510
LOC114845436
Golgin subfamily A member 7.
    
 0.510
LOC114859091
Golgin subfamily A member 7B-like.
    
 0.508
golga7b
Golgin A7 family member B.
    
 0.508
ENSBSLP00000049041
annotation not available
    
 0.498
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.