STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nenfNeudesin neurotrophic factor. (181 aa)    
Predicted Functional Partners:
fopnl
FGFR1OP N-terminal like.
   
    0.630
ankfy1
Ankyrin repeat and FYVE domain containing 1.
    
  0.600
erp27
Endoplasmic reticulum protein 27.
    
 
 0.510
stx5
Syntaxin 5.
    
  0.500
VAPB
VAMP associated protein B and C.
   
  0.492
LOC114855878
Vesicle-associated membrane protein-associated protein B-like.
   
  0.492
vapa
VAMP associated protein A.
   
  0.492
SUMF2
Sulfatase modifying factor 2.
    
 0.489
LOC114857886
B-cell receptor-associated protein 29-like.
   
 0.488
bcap29
B cell receptor associated protein 29.
   
 0.488
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.