STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114849480Histidine triad nucleotide-binding protein 3-like. (156 aa)    
Predicted Functional Partners:
LOC114865022
Acidic repeat-containing protein-like.
    
 0.729
suox
Sulfite oxidase.
  
  0.706
sgf29
SAGA complex associated factor 29.
   
 
  0.647
acp1
Acid phosphatase 1.
  
 
  0.641
flad1
Flavin adenine dinucleotide synthetase 1.
    
  0.615
mnat1
MNAT1 component of CDK activating kinase.
    
 0.604
rrn3
RRN3 homolog, RNA polymerase I transcription factor.
    
 0.593
LOC114847215
Thioredoxin domain-containing protein 3 homolog.
  
 0.586
tyms
Thymidylate synthetase.
  
 
  0.566
ENSBSLP00000003280
annotation not available
   
 0.557
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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