STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114867429AF4/FMR2 family member 1-like. (1136 aa)    
Predicted Functional Partners:
cdk9
Cyclin dependent kinase 9.
    
 0.995
eaf1
ELL associated factor 1.
    
 0.987
aff4
AF4/FMR2 family member 4.
    
0.976
eaf2
ELL associated factor 2.
    
 0.969
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.957
mllt3
MLLT3 super elongation complex subunit.
    
 0.955
mllt1
MLLT1 super elongation complex subunit.
    
 0.955
ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.953
cdc73
Cell division cycle 73.
    
 0.953
ssrp1
Structure specific recognition protein 1.
    
 0.947
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.