STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam20bFAM20B glycosaminoglycan xylosylkinase. (611 aa)    
Predicted Functional Partners:
LOC114870069
Extracellular serine/threonine protein kinase FAM20C-like.
  
 
0.871
LOC114860209
Extracellular serine/threonine protein kinase FAM20C-like.
  
 
0.870
LOC114860472
Extracellular serine/threonine protein kinase FAM20C-like.
  
 
0.867
LOC114845431
Extracellular serine/threonine protein kinase FAM20C-like.
  
 
0.867
ENSBSLP00000048001
annotation not available
   
  0.688
sparc
Secreted protein acidic and cysteine rich.
     
 0.649
mbtps1
Membrane bound transcription factor peptidase, site 1.
     
 0.630
qsox1
Quiescin sulfhydryl oxidase 1.
     
 0.625
LOC114861432
Sulfhydryl oxidase 2-like.
     
 0.625
LOC114857455
Disintegrin and metalloproteinase domain-containing protein 10-like.
   
 
  0.617
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.