STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rab28RAB28, member RAS oncogene family. (222 aa)    
Predicted Functional Partners:
rab3il1
RAB3A interacting protein like 1.
    
 0.703
rab3ip
RAB3A interacting protein.
    
 0.703
LOC114869684
Rab proteins geranylgeranyltransferase component A 1-like.
    
 0.691
ccz1
CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.
    
 0.679
exoc4
Exocyst complex component 4.
    
 0.647
exoc1
Exocyst complex component 1.
    
 0.637
rabggtb
Rab geranylgeranyltransferase subunit beta.
    
 0.637
exoc7
Exocyst complex component 7.
    
 0.636
exoc2
Exocyst complex component 2.
    
 0.635
rabif
RAB interacting factor.
    
 
 0.628
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.