STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ilf2Interleukin enhancer binding factor 2. (400 aa)    
Predicted Functional Partners:
ilf3
phenylalanyl-tRNA synthetase subunit alpha.
   
 
0.989
LOC114845192
Heterogeneous nuclear ribonucleoprotein C-like.
   
 
 0.934
LOC114845021
Heterogeneous nuclear ribonucleoprotein C-like.
   
 
 0.875
snrpd2
Small nuclear ribonucleoprotein D2 polypeptide.
   
   0.867
dhx9
DExH-box helicase 9.
   
 
 0.856
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.855
LOC114860619
THO complex subunit 4-like.
   
  
 0.828
snrpe
Small nuclear ribonucleoprotein polypeptide E.
   
    0.796
LOC114858595
Interleukin enhancer-binding factor 3-like.
   
 
0.781
LOC114853303
Zinc finger RNA-binding protein-like.
   
 
0.781
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.