STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114846050Protoheme IX farnesyltransferase, mitochondrial. (504 aa)    
Predicted Functional Partners:
LOC114842089
Cytochrome c oxidase assembly protein COX15 homolog.
  
 0.998
LOC114845450
Cytochrome c oxidase assembly protein COX11, mitochondrial.
  
 0.994
LOC114856113
Cytochrome c1, heme protein, mitochondrial.
  
 0.981
LOC114857843
Heme-binding protein 1-like.
  
 
 0.971
LOC114865515
Cytochrome b-c1 complex subunit 7.
   
 
 0.959
LOC114861403
Cytochrome c oxidase assembly factor 6 homolog.
    
 0.951
LOC114853894
Cytochrome c-type heme lyase.
   
 
 0.948
LOC114867091
Cytochrome b-c1 complex subunit 9.
   
 
 0.943
LOC114846255
Cytochrome c oxidase subunit 7A-related protein, mitochondrial.
     
 0.943
LOC114863138
Cytochrome c oxidase subunit 7C, mitochondrial.
     
 0.940
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.