STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c14h21orf91Chromosome 14 C21orf91 homolog. (293 aa)    
Predicted Functional Partners:
LOC114856504
E3 ubiquitin-protein ligase NEURL1-like.
      
 0.537
neurl1b
Neuralized E3 ubiquitin protein ligase 1B.
      
 0.537
LOC114841793
E3 ubiquitin-protein ligase NEURL1-like.
      
 0.537
ufc1
Ubiquitin-fold modifier conjugating enzyme 1.
      
 0.422
fbxl17
F-box and leucine rich repeat protein 17.
    
 
 0.411
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.