STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000021526annotation not available (84 aa)    
Predicted Functional Partners:
snrnp200
Small nuclear ribonucleoprotein U5 subunit 200.
    
   0.583
cdv3
CDV3 homolog.
      
 0.528
LOC114866661
Alpha-synuclein-like.
    
 
 0.492
hypk
Huntingtin interacting protein K.
   
  
 0.476
lrrc57
Leucine rich repeat containing 57.
      
 0.436
dap
Death associated protein.
      
 0.434
zfyve19
Zinc finger FYVE-type containing 19.
      
 0.416
prpf8
pre-mRNA processing factor 8.
    
   0.408
pdap1
PDGFA associated protein 1.
      
 0.402
LOC114846218
28 kDa heat- and acid-stable phosphoprotein-like.
      
 0.402
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.