STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pex11gPeroxisomal biogenesis factor 11 gamma. (228 aa)    
Predicted Functional Partners:
pex19
Peroxisomal biogenesis factor 19.
   
 0.975
pex13
Peroxisomal biogenesis factor 13.
   
 0.947
pex11b
Peroxisomal biogenesis factor 11 beta.
    
 0.918
LOC114857938
Peroxisomal membrane protein 11A-like.
    
 0.918
pex14
Peroxisomal biogenesis factor 14.
    
 0.917
pex12
Peroxisomal biogenesis factor 12.
   
 0.907
pex10
Peroxisomal biogenesis factor 10.
    
 0.896
fam185a
Family with sequence similarity 185 member A.
    
 0.885
pex3
Peroxisomal biogenesis factor 3.
   
 0.845
pex2
Peroxisomal biogenesis factor 2.
   
 0.810
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.