STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114869254Lathosterol oxidase-like. (311 aa)    
Predicted Functional Partners:
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
  
 0.974
hsd17b7
Hydroxysteroid 17-beta dehydrogenase 7.
   
 0.966
dhcr7
7-dehydrocholesterol reductase.
   
 0.965
sigmar1
Sigma non-opioid intracellular receptor 1.
   
 0.944
lss
Lanosterol synthase.
   
 0.942
msmo1
Methylsterol monooxygenase 1.
  
0.917
LOC114866878
Cholesterol 25-hydroxylase-like protein 2.
   
 0.911
faxdc2
Fatty acid hydroxylase domain containing 2.
   
 0.911
ch25h
Cholesterol 25-hydroxylase.
   
 0.911
ENSBSLP00000050196
Cholesterol 25-hydroxylase like 1, tandem duplicate 2.
   
 0.911
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.