STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114862428Electrogenic sodium bicarbonate cotransporter 4-like. (988 aa)    
Predicted Functional Partners:
ENSBSLP00000055116
NPHS2 stomatin family member, podocin.
    
 0.531
LOC114866462
Rho-related GTP-binding protein RhoF-like.
    
  0.515
LOC114857402
Protein FAM169B-like.
    
  0.507
LOC114869722
Rho GTPase-activating protein 1-like.
     
 0.498
uaca
Uveal autoantigen with coiled-coil domains and ankyrin repeats.
    
  0.496
ripk4
Receptor interacting serine/threonine kinase 4.
    
 0.480
dnali1
Dynein axonemal light intermediate chain 1.
   
  
 0.479
mst1r
Macrophage stimulating 1 receptor.
    
  0.472
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.472
LOC114856141
Macrophage-stimulating protein receptor-like.
    
  0.472
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.