STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000021949annotation not available (329 aa)    
Predicted Functional Partners:
snapc3
Small nuclear RNA activating complex polypeptide 3.
    
 0.989
LOC114861426
snRNA-activating protein complex subunit 4-like.
    
 0.989
snapc5
Small nuclear RNA activating complex polypeptide 5.
    
 0.977
gtf2b
General transcription factor IIB.
    
 0.950
gtf2a2
General transcription factor IIA subunit 2.
    
  0.874
LOC114847992
TATA box-binding protein-like protein 2.
   
 0.874
LOC114847991
TATA box-binding protein-like protein 2.
   
 0.874
tbp
TATA-box binding protein.
   
 0.871
gtf2a1
General transcription factor IIA subunit 1.
    
  0.866
gtf2a1l
General transcription factor IIA subunit 1 like.
    
  0.824
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.