STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114847819Cytochrome b reductase 1. (275 aa)    
Predicted Functional Partners:
LOC114854405
Mesoderm induction early response protein 2-like.
    
   0.598
CDYL2
Chromodomain Y like 2.
    
   0.593
cdyl
Chromodomain Y like.
    
   0.593
mier3
MIER family member 3.
    
   0.516
mier1
MIER1 transcriptional regulator.
    
   0.516
LOC114856031
Natural resistance-associated macrophage protein 2-like.
      
 0.459
slc40a1
Solute carrier family 40 member 1.
      
 0.429
LOC114843090
Solute carrier family 40 member 1-like.
      
 0.429
foxred1
FAD dependent oxidoreductase domain containing 1.
      
 0.400
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.