STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIPSNAP2Protein NipSnap homolog 2-like. (288 aa)    
Predicted Functional Partners:
mthfsd
Methenyltetrahydrofolate synthetase domain containing.
   
    0.782
smim12
Small integral membrane protein 12.
   
  
 0.739
snu13
Small nuclear ribonucleoprotein 13.
   
    0.694
lamtor1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
   
  0.674
utp15
UTP15 small subunit processome component.
   
    0.674
psmd1
Proteasome 26S subunit, non-ATPase 1.
   
    0.668
wdr6
WD repeat domain 6.
   
    0.668
nop56
NOP56 ribonucleoprotein.
   
    0.631
dbt
Dihydrolipoamide branched chain transacylase E2.
   
 
  0.626
LOC114857749
Structural maintenance of chromosomes protein 1B-like.
   
    0.579
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.